Program blastn blastp blastx tblastn tblastx Expect: 9e-127 1e-100 1e-50 1e-20 1e-10 1e-5 0.0001 0.01 1 10 100 1000 Alignment: master-slave w id PairWise master-slave wo id fms wid fms woid XML HT Database cldb-ant7.aa Antismash7 clusters database all Actinobacteria aa cldb-ant7.nt Antismash7 clusters database all Actinobacteria nucleotide cldb-ant7-cm10k.aa Antismash7 clusters database core min10kbp Actinobacteria aa cldb-ant7-cm10k.nt Antismash7 clusters database core min10kbp Actinobacteria nucleotide cldb-ant7-nm.aa Antismash7 clusters database w/o mycobacteria aa cldb-ant7-nm.nt Antismash7 clusters database w/o mycobacteria nucleotide cldb-ant7-cm10k-nm.aa Antismash7 clusters database core min10kbp w/o mycobacteria aa cldb-ant7-cm10k-nm.nt Antismash7 clusters database core min10kbp w/o mycobacteria nucleotide cldb-ant7-tst.aa Antismash7 clusters database test Actinobacteria aa cldb-ant7-tst.nt Antismash7 clusters database test Actinobacteria nucleotide cldb-ant6.aa Antismash6 clusters database all Actinobacteria aa cldb-ant6.nt Antismash6 clusters database all Actinobacteria nucleotide cldb-ant6-nm.aa Antismash6 clusters database w/o mycobacteria aa cldb-ant6-nm.nt Antismash6 clusters database w/o mycobacteria nucleotide cldb-ant6-nm-str1.aa Antismash6 clusters database w/o myco strain defined aa cldb-ant6-nm-str1.nt Antismash6 clusters database w/o myco strain defined nucleotide cldb-ant6-nm-str2.aa Antismash6 clusters database w/o myco strain collection aa cldb-ant6-nm-str2.nt Antismash6 clusters database w/o myco strain collection nucleotide cldb-ant6-dpb.aa Antismash6 clusters database all Deltaproteobacteria aa cldb-ant6-dpb.nt Antismash6 clusters database all Deltaproteobacteria nucleotide cldb.aa Antismash5 clusters database all aa cldb.nt Antismash5 clusters database all nucleotide
Enter Query sequence below in FASTA format Or load it from disk
Set subseq: From      To
Expect Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Database Genetic Codes (tblast[nx] only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty (for blastx) 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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